Novel enzymes produced by actinobacteria growing on seaweed
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Abstract
Actinobacteria were screened for their ability to produce seaweed polysaccharide-degrading enzymes. Streptomyces strains FA24 and FA56 grown on seaweed which could both produce alginate lyase. The polysaccharide-degrading enzymes were precipitated with ammonium sulphate and then purified using dialysis and anion exchange chromatography. Polysaccharide-degrading enzymes from Streptomyces sp. FA24 had a molecular mass range of 15 – 37 kDa while enzymes from Streptomyces sp. FA56 had an apparent molecular mass of 23 kDa. The optimum pH for activity of polysaccharidedegrading enzymes from Streptomyces spp. FA24 and FA56 against sodium alginate were 8.0 and 7.5, respectively. These enzymes of both strains also showed maximum activity at 30o C. Streptomyces spp. FA24 and FA56 were observed as having a 95% and 99% 16S rRNA gene sequence similarity, respectively, to previously recorded sequences of type strains of actinobacteria isolates, indicating that Streptomyces sp. FA24 could be novel species. The enzymes purified from Streptomyces spp. FA24 and FA56 grown on Bull Kelp powder may be novel alginate lyases
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References
Aguilar, O., Albiter, V., Serrano-Carreon, L. and RitoPalomares, M. 2006. Direct comparison between ion-exchange chromatography and aqueous twophase processes for the partial purification of penicillin acylase produced by E. coli. Journal of Chromatography B Analytical Technology Biomedical and Life Science 835(1-2), 77-83.
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D. J. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25 (17), 3389-402.
Bakunina, I., Nedashkovskaia, O. I., Alekseeva, S. A., Ivanova, E. P., Romanenko, L. A., Gorshkova, N. M., Isakov, V. V., Zviagintseva, T. N. and Mikhailov, V. V. 2002. Degradation of fucoidan by the marine proteobacterium Pseudoalteromonas citrea. Mikrobiologiia 71 (1), 49-55.
Berdy, J. 2005. Bioactive microbial metabolites. The Journal of Antibiotic (Tokyo) 58(1), 1-26.
Chojnacka, K., Saeid, A., Witkowska, Z. and Tuhy, L. 2012. Biologically active compounds in seaweed extracts–the prospects for the application. The Open Conference Proceedings Journal 3, M4.
Burtseva, Y. V., Kusaikin, M. I., Sova, V. V., Shevchenko, N. M., Skobun, A. S. and Zvyagintseva, T. N. 2000. Distribution of fucoidan hydrolases and some glycosidases among marine invertebrates. Russian Journal of Marine Biology 26(6), 453-456.
Descamps, V., Colin, S., Lahaye, M., Jam, M., Richard, C., Potin, P., Barbeyron, T., Yvin, J. C. and Kloareg, B. 2006. Isolation and culture of a marine bacterium degrading the sulfated fucans from marine brown algae. Marine Biotechnology (New York) 8(1), 27- 39.
Fukahori, S., Yano, H., Akiba, J., Ogasawara, S., Momosaki, S., Sanada, S., Kuratomi, K., Ishizaki, Y., Moriya, F., Yagi, M. and Kojiro, M. 2008. Fucoidan, a major component of brown seaweed, prohibits the growth of human cancer cell lines in vitro. Molecular Medicine Reports 1(4), 537-42.
Goodfellow, M., Stanton, L., Simpson, K. and Minnikin, D. 1990. Numerical and chemical classification of Actinoplanes and some related actinomycetes. Journal of general microbiology 136(1), 19-36.
Hu, X., Jiang, X. and Hwang, H. M. 2006. Purification and characterization of an alginate lyase from marine Bacterium Vibrio sp. mutant strain 510-64. Current Microbiology 53(2), 135-40.
Iwamoto, Y., Araki, R., Iriyama, K., Oda, T., Fukuda, H., Hayashida, S. and Muramatsu, T. 2001. Purification and characterization of bifunctional alginate lyase from Alteromonas sp. strain no. 272 and its action on saturated oligomeric substrates. Bioscience Biotechnology Biochemistry 65(1), 133-42.
Jemimah, N. S., Mohana S. V. and Subathra D. C. 2011. Novel anticancer compounds from marine actinomycetes : A Review. Journal of Pharmacy Research 4(4), 1285 - 1287.
Kieser, T. and Foundation, J. I. 2000. Practical Streptomyces Genetics. John Innes Foundation. Kumar, C. G. and Takagi, H., 1999. Microbial alkaline proteases: from a bioindustrial viewpoint. Biotechnology Advances 17(7), 561-94.
Kusaykin, Chizhov, A. O., Grachev, A. A., Alekseeva, S. A., Bakunina, I. Y., Nedashkovskaya, O. I., Sova, V. V. and Zvyagintseva, T. N. 2006. A comparative study of specificity of fucoidanases from marine microorganisms and invertebrates. Journal of Applied Phycology 18, 369-373.
Kusaykin, Bakunina, I., Sova, V., Ermakova, S., Kuznetsova, T., Besednova, N., Zaporozhets, T. and Zvyagintseva, T. 2008. Structure, biological activity, and enzymatic transformation of fucoidans from the brown seaweeds. Biotechnology Journal 3(7), 904-15.
Li, B., Lu, F., Wei, X. and Zhao, R. 2008. Fucoidan: structure and bioactivity. Molecules (Basel, Switzerland) 13(8), 1671-1695.
Li, Y. X. and Kim, S. K. 2011. Utilization of seaweed derived ingredients as potential antioxidants and functional ingredients in the food industry: An overview. Food Science and Biotechnology 20(6), 1461-1466.
Rosenberg, E. F., DeLong, S,. Lory, E., Stackebrandt, F. and Thompson 2014. The Prokaryotes. Actinobacteria. Springer Netherlands, 734-860; ISBN: 978-3-642- 30137-7.
Sakatoku, A., Wakabayashi, M., Tanaka, Y., Tanaka, D. and Nakamura, S. 2012. Isolation of a novel Saccharophagus species (Myt-1) capable of degrading a variety of seaweeds and polysaccharides. Microbiology Open 1(1), 2-12.
Sawabe, T., Ohtsuka, M. and Ezura, Y. 1997. Novel alginate lyases from marine bacterium Alteromonas sp. strain H-4’, Carbohydrate Research 304(1), 69-76.
Schaumann, K. and Weide, G. 1990. Enzymatic degradation of alginate by marine fungi. Hydrobiologia 204-205(1), 589-596.
Selvam, K. 2011. Screening and quantification of marine actinomycetes producing industrial enzymes amylase, cellulase and lipase from south coast of India. International Journal of Pharmaceutical & Biological Archive 2(5), 1481-1487.
Silchenko, A. S., Kusaykin, M. I., Kurilenko, V. V., Zakharenko, A. M., Isakov, V. V., Zaporozhets, T. S., Gazha, A. K. and Zvyagintseva, T. N. 2013. Hydrolysis of fucoidan by fucoidanase isolated from the marine bacterium, Formosa algae. Marine Drugs 11(7), 2413-30.
Silchenko, A. S., Kusaykin, M. I., Zakharenko, A. M., Menshova, R. V., Khanh, H. H. N., Dmitrenok, P. S., Isakov, V. V. and Zvyagintseva, T. N. 2014. Endo-1,4-fucoidanase from Vietnamese marine mollusk Lambis sp. which producing sulphated fucooligosaccharides. Journal of Molecular Catalysis B: Enzymatic 102, 154-160.
Vandamme, P., Pot, B., Gillis, M., de Vos, P., Kersters, K., Swings, J. 1996. Polyphasic taxonomy, a consensus approach to bacterial systematics. Microbiology Review 60(2), 407-438.
Wijesinghe, W. A. and Jeon, Y. J. 2012. Enzyme-assistant extraction (EAE) of bioactive components: a useful approach for recovery of industrially important metabolites from seaweeds: a review. Fitoterapia 83(1), 6-12.