PRELIMINARILY STUDY OF TOUCH DNA DETECTION AND BUCCAL ON COTTON SWAB BY USING SYBR®GREEN I NUCLEIC ACID GEL STAIN

Authors

  • Parncheewa Panjaruang Graduate Program in Forensic Science, Faculty of Allied Health Sciences, Thammasat University, Rangsit Campus.
  • Sunisa Aobaom Department of Medical Technology, Faculty of Allied Health Sciences, Thammasat University, Rangsit Campus.

Keywords:

Touch DNA, SYBR Green I, Cotton swab, Forensic Science

Abstract

Touch DNA and buccal samples are among the most common sample types submitted to DNA forensic laboratory. However, some Touch DNA samples and buccal collections don’t realize DNA appears on the sample until the DNA detection processing is completed. This study aims to investigate the touch DNA and buccal sample detection on cotton swabs by using SYBR Green I Nucleic Acid Gel Stain. So, this screening method reduces samples and resources in Thailand DNA forensic laboratory processing. Touch DNA samples were collected from male and female volunteers. Buccal samples were collected from female volunteers. All samples were stained with 5x SYBR®Green I and detected using Gel Documentation System (Major Science, USA) and Fluorescence microscopy. Fluorescence levels were detected by Image J compared with a non-DNA cotton swab. The results showed that Cotton swabs are unsuitable for the touch DNA screening method However it can be used to detect DNA from Buccal swabs. Cotton swab that collect Buccal sample and stain it with 5X SYBR®Green I revealed that SYBR green I fluorescence was visualized significant differently from DNA-free swab at 95% confidence interval when tested with Paired Samples T-Test (p-value > 0.05).

Downloads

Download data is not yet available.

References

Theda, C., Hwang, S. H., Czajko, A., Loke, Y. J., Leong, P., and Craig, J. M. (2018). Quantitation of the cellular content of saliva and buccal swab samples. Scientific reports, 8(1), Article 6944.

Haines, A. M., Tobe, S. S., Kobus H., and Linacre, A. (2013). Detection of DNA within fingermarks. Forensic Science International: Genetics Supplement Series, 4(1), e290-e291.

Haines, A. M., Tobe, S. S., Kobus, H., and Linacre, A. (2015). Finding DNA: Using fluorescent in situ detection. Forensic Science International: Genetics Supplement Series, 5, e501-e502.

Tonkrongjun, P., Phetpeng, S., Asawutmangkul, W., Sotthibandhu, S., Kitpipit, T., and Thanakiatkrai, P. (2019). Improved STR profiles from improvised explosive device (IED): fluorescence latent DNA detection and direct PCR. Forensic Science International: Genetics, 41, 168-176.

Kanokwongnuwut, P., Kirkbride, P., and Linacre, A. (2018). Visualising latent DNA on swabs. Forensic Science International, 291, 115-123.

Thermo Fisher Scientific. (2017). Quantifiler™HP and Trio DNA QuantificationKits USER GUIDE. Retrieved from https://tools.thermofisher.com/content/sfs/manuals/4485354.pdf

Brownlow, R. J., Dagnall, K. E., and Ames, C. E. (2012). A Comparison of DNA Collection and Retrieval from Two Swab Types (Cotton and Nylon Flocked Swab) when Processed Using Three QIAGEN Extraction Methods. Journal of Forensic Sciences, 57(3), 713-717.

Burrill, J., Daniel, B., and Frascione, N., (2019). A review of trace “Touch DNA” deposits: Variability factors and an exploration of cellular composition. Forensic Science International: Genetics, 39, 8-18.

Dragan, A. I., Pavlovic, R., McGivney, J. B., Casas-Finet, J. R., Bishop, E. S., Strouse, R. J., Schenerman, M. A., and Geddes, C. D. (2012). SYBR Green I: Fluorescence Properties and Interaction with DNA. Journal of Fluorescence, 22, 1189-1199.

Downloads

Published

2023-06-09

How to Cite

Panjaruang, P., & Aobaom, S. (2023). PRELIMINARILY STUDY OF TOUCH DNA DETECTION AND BUCCAL ON COTTON SWAB BY USING SYBR®GREEN I NUCLEIC ACID GEL STAIN. Srinakharinwirot University Journal of Sciences and Technology, 15(29, January-June), 1–11, Article 249779. Retrieved from https://ph02.tci-thaijo.org/index.php/swujournal/article/view/249779